Supported search engines and databases
PLGS version 2.3 (*final_peptide.csv)
Note, an alternative plugin is available for versions 2.5 and 2.4.
This add-on allows you to import peptide identification results from Waters MSá´± data generated by ProteinLynx Global Server (PLGS).
Before analysing samples in PLGS you should first us its automation options to make sure it will produce final peptide files.
- Open Tools|Automation Setup
- Spectra Output
- Apex3D
- Ion Accounting Output
- ensure "final_peptide" is ticked and select the output folder
You can then load the Waters RAW folders directly into PLGS. Load results into Progenesis LC-MS by finding and importing the final peptide reports from the output folder selected above, there should be one file for every sample analysed.
| Export format: | n/a |
|---|---|
| Import format: | PLGS final peptide reports (*final_peptide.csv) |
See also
More peptide search formats supported by Progenesis LC-MS.